ID	chrom	start	end	num.mark	seg.median.logR	copy.number	call	subclone.status
MCF7-P_UBD3377_S16	1	1000001	86000000	85	-0.352648047709776	3	GAIN	0
MCF7-P_UBD3377_S16	1	86000001	106000000	20	-0.900570639984036	2	NEUT	0
MCF7-P_UBD3377_S16	1	106000001	154000000	48	0.55535535712492	5	HLAMP	0
MCF7-P_UBD3377_S16	1	154000001	159000000	5	-0.187691739429572	3	GAIN	0
MCF7-P_UBD3377_S16	1	159000001	168000000	9	-0.771742300917774	3	GAIN	1
MCF7-P_UBD3377_S16	1	168000001	208000000	40	0.409848020690941	5	HLAMP	0
MCF7-P_UBD3377_S16	1	208000001	214000000	6	-0.890468889307731	2	NEUT	0
MCF7-P_UBD3377_S16	1	214000001	220000000	6	1.09496514057358	5	HLAMP	0
MCF7-P_UBD3377_S16	1	220000001	248000000	28	-0.0198702387981637	4	AMP	0
MCF7-P_UBD3377_S16	2	1	223000000	223	0.0902174916869503	4	AMP	0
MCF7-P_UBD3377_S16	2	223000001	243000000	20	-0.310742084857074	3	GAIN	0
MCF7-P_UBD3377_S16	3	1000001	24000000	23	0.428461672108491	5	HLAMP	0
MCF7-P_UBD3377_S16	3	24000001	30000000	6	0.136083652426892	4	AMP	0
MCF7-P_UBD3377_S16	3	30000001	41000000	11	-0.213318331440883	3	GAIN	0
MCF7-P_UBD3377_S16	3	41000001	53000000	12	-0.729142401750405	3	GAIN	1
MCF7-P_UBD3377_S16	3	53000001	61000000	8	-0.91594688372983	2	NEUT	0
MCF7-P_UBD3377_S16	3	61000001	65000000	4	2.332363234449	5	HLAMP	0
MCF7-P_UBD3377_S16	3	65000001	74000000	9	-0.275766828980803	3	GAIN	0
MCF7-P_UBD3377_S16	3	74000001	145000000	71	0.119960092649917	4	AMP	0
MCF7-P_UBD3377_S16	3	145000001	176000000	31	0.435884338093864	5	HLAMP	0
MCF7-P_UBD3377_S16	3	176000001	191000000	15	0.110728287083269	4	AMP	0
MCF7-P_UBD3377_S16	3	191000001	197000000	6	0.404964497977532	5	HLAMP	0
MCF7-P_UBD3377_S16	4	1	181000000	181	-0.322168229580914	3	GAIN	0
MCF7-P_UBD3377_S16	4	181000001	191000000	10	-0.948947090095125	2	NEUT	0
MCF7-P_UBD3377_S16	5	1000001	29000000	28	0.495293077182631	5	HLAMP	0
MCF7-P_UBD3377_S16	5	29000001	112000000	83	0.08314107251139	4	AMP	0
MCF7-P_UBD3377_S16	5	112000001	180000000	68	0.243235498503797	5	HLAMP	0
MCF7-P_UBD3377_S16	6	1000001	155000000	154	0.0636574759841846	4	AMP	0
MCF7-P_UBD3377_S16	6	155000001	170000000	15	-0.926847887458787	2	NEUT	0
MCF7-P_UBD3377_S16	7	1000001	9000000	8	0.370286437279684	5	HLAMP	0
MCF7-P_UBD3377_S16	7	9000001	31000000	22	0.0828496481131304	4	AMP	0
MCF7-P_UBD3377_S16	7	31000001	35000000	4	0.700380833415242	5	HLAMP	0
MCF7-P_UBD3377_S16	7	36000001	56000000	20	-0.243440361199604	3	GAIN	0
MCF7-P_UBD3377_S16	7	67000001	76000000	9	0.0398097269582902	4	AMP	0
MCF7-P_UBD3377_S16	7	77000001	114000000	37	0.431126329849013	5	HLAMP	0
MCF7-P_UBD3377_S16	7	114000001	159000000	45	0.110726844388228	4	AMP	0
MCF7-P_UBD3377_S16	8	1000001	43000000	42	-0.915287572096144	2	NEUT	0
MCF7-P_UBD3377_S16	8	47000001	145000000	98	0.691488061183203	5	HLAMP	0
MCF7-P_UBD3377_S16	9	1000001	78000000	77	-0.341325777028879	3	GAIN	0
MCF7-P_UBD3377_S16	9	78000001	141000000	63	0.12809544998549	4	AMP	0
MCF7-P_UBD3377_S16	10	1000001	12000000	11	0.343888003421498	5	HLAMP	0
MCF7-P_UBD3377_S16	10	12000001	135000000	123	0.0149290082831189	4	AMP	0
MCF7-P_UBD3377_S16	11	1000001	12000000	11	-0.902098454032337	2	NEUT	0
MCF7-P_UBD3377_S16	11	12000001	44000000	32	-0.329912616560406	3	GAIN	0
MCF7-P_UBD3377_S16	11	44000001	60000000	16	-0.785186776003818	3	GAIN	1
MCF7-P_UBD3377_S16	11	60000001	65000000	5	0.10509889103372	4	AMP	0
MCF7-P_UBD3377_S16	11	65000001	87000000	22	0.437458318383474	5	HLAMP	0
MCF7-P_UBD3377_S16	11	87000001	117000000	30	-0.900729336438534	2	NEUT	0
MCF7-P_UBD3377_S16	11	117000001	120000000	3	0.384651351801815	5	HLAMP	0
MCF7-P_UBD3377_S16	11	120000001	135000000	15	-0.933119282801532	2	NEUT	0
MCF7-P_UBD3377_S16	12	1000001	33000000	32	-0.360486209866925	3	GAIN	0
MCF7-P_UBD3377_S16	12	33000001	49000000	16	0.0585676478799285	4	AMP	0
MCF7-P_UBD3377_S16	12	49000001	87000000	38	0.409620074874481	5	HLAMP	0
MCF7-P_UBD3377_S16	12	87000001	134000000	47	0.0927263383630563	4	AMP	0
MCF7-P_UBD3377_S16	13	20000001	48000000	28	0.0719270039585602	4	AMP	0
MCF7-P_UBD3377_S16	13	48000001	60000000	12	-0.311104201312337	3	GAIN	0
MCF7-P_UBD3377_S16	13	60000001	114000000	54	-0.890233730016066	2	NEUT	0
MCF7-P_UBD3377_S16	14	21000001	106000000	85	0.439883488747208	5	HLAMP	0
MCF7-P_UBD3377_S16	15	25000001	49000000	24	-0.359245492131761	3	GAIN	0
MCF7-P_UBD3377_S16	15	49000001	57000000	8	0.928671453990471	5	HLAMP	0
MCF7-P_UBD3377_S16	15	57000001	63000000	6	-0.371616602107384	3	GAIN	0
MCF7-P_UBD3377_S16	15	63000001	102000000	39	0.697367043474825	5	HLAMP	0
MCF7-P_UBD3377_S16	16	1000001	32000000	31	0.0488539821696231	4	AMP	0
MCF7-P_UBD3377_S16	16	47000001	67000000	20	-0.797806029526474	3	GAIN	1
MCF7-P_UBD3377_S16	16	67000001	90000000	23	0.428480427144022	5	HLAMP	0
MCF7-P_UBD3377_S16	17	1000001	28000000	27	0.000764628371671182	4	AMP	0
MCF7-P_UBD3377_S16	17	28000001	38000000	10	-0.928104474839402	2	NEUT	0
MCF7-P_UBD3377_S16	17	38000001	44000000	6	-0.375609981980564	3	GAIN	0
MCF7-P_UBD3377_S16	17	45000001	71000000	26	1.03386844828697	5	HLAMP	0
MCF7-P_UBD3377_S16	17	71000001	81000000	10	0.113208279858557	4	AMP	0
MCF7-P_UBD3377_S16	18	1	34000000	34	-0.3466507644248	3	GAIN	0
MCF7-P_UBD3377_S16	18	34000001	78000000	44	-0.902834228503191	2	NEUT	0
MCF7-P_UBD3377_S16	19	1000001	10000000	9	-0.990424572520682	1	HETD	1
MCF7-P_UBD3377_S16	19	10000001	59000000	49	0.0603363920000582	4	AMP	0
MCF7-P_UBD3377_S16	20	1	6000000	6	-0.297127371756205	3	GAIN	0
MCF7-P_UBD3377_S16	20	6000001	63000000	57	0.542653869984934	5	HLAMP	0
MCF7-P_UBD3377_S16	21	16000001	39000000	23	-0.403919986767928	3	GAIN	0
MCF7-P_UBD3377_S16	21	39000001	48000000	9	0.624982705188303	5	HLAMP	0
MCF7-P_UBD3377_S16	22	19000001	35000000	16	-0.384515738467972	3	GAIN	0
MCF7-P_UBD3377_S16	22	35000001	51000000	16	-0.909612009805287	2	NEUT	0
MCF7-P_UBD3377_S16	X	4000001	88000000	84	-0.814326330439694	3	GAIN	1
MCF7-P_UBD3377_S16	X	93000001	151000000	58	-0.299903117014875	3	GAIN	0